Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq4469 123 3e-26 >seq4469 Length=16579 Score = 123 bits (136), Expect = 3e-26 Identities = 117/152 (77%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTC---CCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCA 79 |||||||||| |||| | || | | |||| |||||||||| |||| | ||| |||| Sbjct 8842 CGGGGTCTTTCCGTCTAACTATAGAG---AATCCGCATCTTCACGGATAATTCAAATTCA 8898 Query 80 CTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTA 139 ||||| | | ||||||| |||||||||| |||||||||||||||| Sbjct 8899 CTGAGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTA 8958 Query 140 CCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||||||||||||||||||||||||| Sbjct 8959 CCCGACAAGGAATTTCGCTACCTTAGGACCGT 8990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547154708256