Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq528 77.0 6e-12 >seq528 Length=30525 Score = 77.0 bits (84), Expect = 6e-12 Identities = 151/221 (68%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 35 GACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTG 94 ||||| | | | || |||| || || ||||| ||||| || ||| ||||| Sbjct 13006 GACGAGGTGCTGGTGGAGCGCATCGCGGGCCGCCGCGTGCACCCGGCCAGCGGCCGTAGC 13065 Query 95 TACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGAC 154 |||||| | | | ||||| ||||| || |||||||||||| | || ||||| | Sbjct 13066 TACCACGTCAAGTTCGCCCCGCCCAAGGTGGCCGGCAAGGACGATATCACGGGCGAGCCC 13125 Query 155 CTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGTCAC-CGCCTGTCTGTTTACCA 213 ||| | |||||||||||||||| ||| | | || ||| | | || || | | ||| Sbjct 13126 CTGATCCAGCGCAAGGACGACAACGAGGCCA-CGCTCGGCTCGCGTCTCCAGGCCTTCCA 13184 Query 214 TTCGCAAACCAAGCCGCTGGTGGACTTCTACCAGAAGCTGG 254 ||| ||| ||||| || | |||||||||| |||| || Sbjct 13185 CAAGCAGACCCAGCCGGTGATCGACTTCTACCGCAAGCAGG 13225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899123172352