Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq4469 192 2e-46 >seq4469 Length=16579 Score = 192 bits (212), Expect = 2e-46 Identities = 342/494 (69%), Gaps = 40/494 (8%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 8627 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 8685 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| | |||| | | |||| ||| | | | |||||||| Sbjct 8686 TACACTGTCT---ATTTAGATAA-------ATATTAGTTATTTATTTTAATAAGAGTGGT 8735 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGT---GGCCGCATCATAGTCTCCCACCTAT 251 ||||||| | || |||| |||||||| || | | ||| | | |||| ||| Sbjct 8736 ATTTCAAGGATATCTAAACAATTTACTAGCGTAAAGGTCTAA--ATAAT-TACCACTTAT 8792 Query 252 CCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTT 310 ||||||| | | || ||||| ||| | |||| ||||| | |||||||||| Sbjct 8793 GCTACACATATTAGATAATATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTC 8852 Query 311 CGTCCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| | | ||| | ||||||| || || | ||| ||||| | | || | | Sbjct 8853 CGTCTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATT 8911 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 8912 GGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAAT 8971 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGC 489 ||||||||||||||| || | |||||| ||||||||||||||| |||| ||| Sbjct 8972 TTCGCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATT------ 9025 Query 490 CTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTC 549 | || || || |||| |||| |||||||||||||||||| ||| Sbjct 9026 -------------TAATGCGCAAACATTTCCTTTTAATCTTCCAGCACCGGGCAGGTGTC 9072 Query 550 AGTCCGTATACCTC 563 || || ||||| || Sbjct 9073 AGACCCTATACATC 9086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702254546944