Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq26385 381 1e-103 seq23188 381 1e-103 seq22182 381 1e-103 seq13970 381 1e-103 seq9650 381 1e-103 seq45469 378 1e-102 seq6260 331 2e-88 seq3231 306 6e-81 seq4019 255 1e-65 seq23500 248 1e-63 seq30593 190 3e-46 seq38711 185 1e-44 seq43409 158 2e-36 seq413 152 9e-35 seq44409 136 7e-30 >seq26385 Length=1259 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1144 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 1085 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 1084 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 1025 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1024 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 965 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 964 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 905 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 904 CCACGCTTTCACGGTTTGTATTCA 881 >seq23188 Length=1046 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 928 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 869 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 868 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 809 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 808 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 749 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 748 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 689 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 688 CCACGCTTTCACGGTTTGTATTCA 665 >seq22182 Length=991 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 895 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 836 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 835 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 776 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 775 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 716 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 715 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 656 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 655 CCACGCTTTCACGGTTTGTATTCA 632 >seq13970 Length=675 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 597 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 538 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 537 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 478 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 477 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 418 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 417 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 358 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 357 CCACGCTTTCACGGTTTGTATTCA 334 >seq9650 Length=542 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 302 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 243 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 242 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 183 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 182 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 123 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 122 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 63 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 62 CCACGCTTTCACGGTTTGTATTCA 39 >seq45469 Length=32483 Score = 378 bits (418), Expect = 1e-102 Identities = 242/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 17964 TCATCAGTAGGGTAAAACTAATCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 18023 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 18024 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 18083 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 18084 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 18143 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 18144 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGG 18203 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 18204 CCACGCTTTCACGGTTTGTATTCA 18227 >seq6260 Length=473 Score = 331 bits (366), Expect = 2e-88 Identities = 213/233 (91%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 471 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACAATTGGCGAG 412 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181 |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 411 TTCTACTTCGCAATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTATG 352 Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 351 GACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTA 292 Query 242 AAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||| | | ||||||||||||||||||||| |||||| |||||||||||| Sbjct 291 AAATTCAAAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 239 >seq3231 Length=371 Score = 306 bits (338), Expect = 6e-81 Identities = 199/219 (91%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 |||||||||||||||||||||||||||||||||||| || ||| |||| ||||| || Sbjct 371 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAAT 312 Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 311 GATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCC 252 Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC 255 |||||||||||||||||||||||||||||||| |||||||||| | ||||| | | || Sbjct 251 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAAC 192 Query 256 TAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||||||||||||||| |||||| |||||||||||| Sbjct 191 TAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 153 >seq4019 Length=403 Score = 255 bits (282), Expect = 1e-65 Identities = 183/208 (88%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 |||||||||||||||||||||||| || ||| |||| ||||| |||||||||||||| Sbjct 403 CTATTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGC 344 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 343 CGACATCGAAGAATC-AAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTA 285 Query 208 T-CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 | ||||||||| | |||||| |||||||||| | ||||| | | ||||||||||||| Sbjct 284 TCCCCTGTGGTTAACTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGA 225 Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294 |||||||| |||||| |||||||||||| Sbjct 224 TAGGCCACGCTTTCACGGTTTGTATTCA 197 >seq23500 Length=1064 Score = 248 bits (274), Expect = 1e-63 Identities = 161/177 (91%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 ||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1062 CGAGTTCTACTTCGCAATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGC 1003 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1002 TATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAG 943 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | ||||| | | ||||||||||||||||||||| |||||| |||||||||||| Sbjct 942 CTTAAAATTCAAAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 886 >seq30593 Length=1661 Score = 190 bits (210), Expect = 3e-46 Identities = 126/140 (90%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1313 GAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATTCCTGT 1372 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||||| |||||||||| | ||||| | | ||||||||||||||||||||| Sbjct 1373 GGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGATAGGCCAC 1432 Query 275 ACTTTCATGGTTTGTATTCA 294 ||| || |||||||||||| Sbjct 1433 GCTTACACGGTTTGTATTCA 1452 >seq38711 Length=3386 Score = 185 bits (204), Expect = 1e-44 Identities = 125/140 (89%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 889 GAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 948 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||||| |||||| ||| | ||||| | | || |||||||||||||||||| Sbjct 949 GGTAACTTTTCTGACACCTCCAGCTTAAAATTCAAAAGAACGAAAGGATCGATAGGCCAC 1008 Query 275 ACTTTCATGGTTTGTATTCA 294 ||| || |||||||||||| Sbjct 1009 GCTTACACGGTTTGTATTCA 1028 >seq43409 Length=12192 Score = 158 bits (174), Expect = 2e-36 Identities = 120/142 (85%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||| ||||||||||||| ||||||||||| || |||||||| |||| Sbjct 4168 TCATCAGTAGGGTAAACCTAACCTGTCTCACAACGGTCTAAACTCACCTCACGTTGCCTA 4109 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||| ||||||||||||| || ||| |||| |||| | ||||||||||||||| Sbjct 4108 TTAGTGGTTGAACAATCCAACAATTGGCGAGTTCTATTTCGCAAGGATAGGAAGAGCCGA 4049 Query 151 CATCGAAGGATCAAAAAGCAAC 172 ||||| | | |||||||||| Sbjct 4048 CATCGTGGATTTAAAAAGCAAC 4027 >seq413 Length=223 Score = 152 bits (168), Expect = 9e-35 Identities = 98/107 (92%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 107 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 48 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 ||||||||||||||||||||| || ||| |||| ||||| |||| Sbjct 47 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGA 1 >seq44409 Length=18265 Score = 136 bits (150), Expect = 7e-30 Identities = 87/95 (92%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 3844 GTAGGGTAAAACTGACCTGTCTCACGACGGTGTAAACCCAGCTCACGTTCCCTATTAGTG 3785 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||| || ||| |||||||||| Sbjct 3784 GGTGAACAATCCAACAATTGGCGAGTTCTGCTTCG 3750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854004754560