Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq46239 111 6e-22 >seq46239 Length=243 Score = 111 bits (122), Expect = 6e-22 Identities = 119/156 (76%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| ||| ||||||||||| | ||||||||| ||||||||| |||| ||||| || Sbjct 30 ATTTCGCGGAAAACCAGCTATCTCTGAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 89 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||| || | ||| | || || ||| ||||| ||||||| || ||| || |||| Sbjct 90 ATCTCCATATTTTGCCACATATGTGAGTTCGATCCTCCAAATAGTTTTA-CCTATTTTCA 148 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 | ||| ||||| ||||||||| | |||||||||| Sbjct 149 ATCTGTTCATGGTTAGATCACTCAGTTTCGGGTCTT 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816759178240