Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq26116 82.4 9e-14 seq3700 82.4 9e-14 seq1878 82.4 9e-14 seq1223 82.4 9e-14 seq45402 73.4 5e-11 >seq26116 Length=1118 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 498 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 557 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 558 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 600 >seq3700 Length=390 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 278 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 219 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 218 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 176 >seq1878 Length=308 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 229 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 170 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 169 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 127 >seq1223 Length=273 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 130 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 189 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 190 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 232 >seq45402 Length=31084 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/103 (77%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTCGG-- 66 || |||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 9534 AACCCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 9475 Query 67 --GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 || | ||||||||| |||||||||||||| ||| ||||| Sbjct 9474 AAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 9432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594933264840