Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2180 111 1e-22 seq46232 93.3 4e-17 >seq2180 Length=322 Score = 111 bits (122), Expect = 1e-22 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 162 TGTAATTATCATTGTATGACGTGTGTAGCCCAACCCATAAGGGCCATGAGGACTTGACGT 103 Query 135 CATCCCCACCTTCC 148 |||||||||||||| Sbjct 102 CATCCCCACCTTCC 89 >seq46232 Length=3510 Score = 93.3 bits (102), Expect = 4e-17 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 75 TGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGT 134 |||| || ||||||| ||||||| ||||| || |||||||||||||| |||||||||| Sbjct 368 TGTAATTATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGT 427 Query 135 CATCCCCACCTTCC 148 |||||||||||||| Sbjct 428 CATCCCCACCTTCC 441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415813572200