Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq46232 78.8 2e-12 seq46228 78.8 2e-12 >seq46232 Length=3510 Score = 78.8 bits (86), Expect = 2e-12 Identities = 118/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTG 126 |||| ||| | || ||||| ||||||| | | |||||||| |||| | | Sbjct 1121 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCTTCATCACTCACTCGGTATT 1180 Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| ||| || ||| ||||| |||| ||||| ||||||||||| | ||||| Sbjct 1181 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTT 1239 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 || |||||||||||| ||||||||| || | | || ||| |||| Sbjct 1240 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCA-AACC 1283 >seq46228 Length=739 Score = 78.8 bits (86), Expect = 2e-12 Identities = 118/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTG 126 |||| ||| | || ||||| ||||||| | | |||||||| |||| | | Sbjct 316 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCTTCATCACTCACTCGGTATT 375 Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| ||| || ||| ||||| |||| ||||| ||||||||||| | ||||| Sbjct 376 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTT 434 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 || |||||||||||| ||||||||| || | | || ||| |||| Sbjct 435 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCA-AACC 478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068305573120