Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq2055 87.8 4e-15 seq2288 73.4 8e-11 >seq2055 Length=202 Score = 87.8 bits (96), Expect = 4e-15 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||||| | || |||||||||||||||||| ||||| ||||||||||||||| | Sbjct 17 GACAGTGTATGGTTGGTAGTTTGACTGGGGCGGTCACCTCCTAAAGAGTAACGGAGGGGG 76 Query 173 CCAAAGATACCCTCAGCTTGGATGGAA--ACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 ||||| || |||| |||||| | | || | | || || || | ||| || Sbjct 77 ACAAAGGTAAGCTCAAATTGGATTTTAGTATCAATTGTAGAGCATAATGGTATAAGCTTG 136 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCG 285 ||||||| | | || || | |||||||||||||||| | || ||||||| Sbjct 137 CTTGACTGTAAGATAGACATATCAAACAGGGACGAAAGTCGGTCATAGTGATCCG 191 >seq2288 Length=231 Score = 73.4 bits (80), Expect = 8e-11 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||||| | || |||||||||||||||||| ||||| ||||||||||||||| | Sbjct 155 GACAGTGTATGGTTGGTAGTTTGACTGGGGCGGTCACCTCCTAAAGAGTAACGGAGGTGT 96 Query 173 CCAAAGATACCCTCAGCTTGGAT 195 ||||| || |||| || ||| Sbjct 95 ACAAAGGTAAGCTCAAATTTGAT 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982350624576