Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq3204 111 6e-22 seq2507 111 6e-22 >seq3204 Length=251 Score = 111 bits (122), Expect = 6e-22 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| ||| ||||||||||| | ||||||||| ||||||||| |||| ||||| || Sbjct 215 ATTTCGCGGAAAACCAGCTATCTCCGAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 156 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||| || | ||| | || || ||| ||||| ||||||| || ||||| |||| Sbjct 155 ATCTCCATATTTTGCCACATATGTGAGTTCGATCCTCCAAATAGTTTTACCTATTTTTCA 96 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 | ||| ||||| |||||| || | |||||||||| Sbjct 95 ATCTGTTCATGGTTAGATCGCTCGGTTTCGGGTCTT 60 >seq2507 Length=251 Score = 111 bits (122), Expect = 6e-22 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| ||| ||||||||||| | ||||||||| ||||||||| |||| ||||| || Sbjct 215 ATTTCGCGGAAAACCAGCTATCTCCGAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 156 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||| || | ||| | || || ||| ||||| ||||||| || ||||| |||| Sbjct 155 ATCTCCATATTTTGCCACATATGTGAGTTCGATCCTCCAAATAGTTTTACCTATTTTTCA 96 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 | ||| ||||| |||||| || | |||||||||| Sbjct 95 ATCTGTTCATGGTTAGATCTCTCGGTTTCGGGTCTT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817508647424