Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq3790 75.2 2e-11 >seq3790 Length=68451 Score = 75.2 bits (82), Expect = 2e-11 Identities = 136/197 (69%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 51 AGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACC--GTCTA 108 ||||||| || ||||||||||| || ||| || ||| |||||| || | Sbjct 15938 AGCGTATCGCCGGCCGTCGCGTGCACCCTGCCAGTGGTCGCAGCTACCACGTGAAGTTTG 15997 Query 109 CAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAA 168 | ||||| ||||| || |||||||||||||| || ||||| ||| | |||||||| Sbjct 15998 CC--CCGCCTAAGGTGGCCGGCAAGGACGATGTCACGGGCGAGCCGCTGATCCAGCGCAA 16055 Query 169 GGACGACACCGAAGAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCC 228 |||||||| ||||| || || | ||||| | || ||| ||| || |||| Sbjct 16056 GGACGACAACGAAGCCACGCTTGGCTCGCGCCTCCAGGCTTTCCACAAGCAGACGCAGCC 16115 Query 229 GCTGGTGGACTTCTACC 245 || | |||||||||| Sbjct 16116 CGTGATCGACTTCTACC 16132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899154806208