Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq3769 104 5e-20 seq3770 102 2e-19 >seq3769 Length=252 Score = 104 bits (114), Expect = 5e-20 Identities = 91/112 (81%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 ||||||| || |||||| | || |||||| | ||||| || ||| ||||| |||| Sbjct 138 GCTTCGGTAAATTTCTTAAGTCTCGATACATTTTAGGCGCAAAAA-ACTAGACCAATGAG 196 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGT 323 ||||||||| ||||| ||||||||||||||||||||| |||| |||||||| Sbjct 197 CTATTACGCTTTCTTTAAAGGATGGCTGCTTCCAAGCCTACCTACTGGTTGT 248 >seq3770 Length=253 Score = 102 bits (112), Expect = 2e-19 Identities = 91/113 (81%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCA-CTTGACCAGTGA 270 ||||||| || |||||| | || |||||| | ||||| || | || ||||| ||| Sbjct 138 GCTTCGGTAAATTTCTTAAGTCTCGATACATTTTAGGCGCAAAAAAAACTAGACCAATGA 197 Query 271 GCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGT 323 |||||||||| ||||| ||||||||||||||||||||| |||| |||||||| Sbjct 198 GCTATTACGCTTTCTTTAAAGGATGGCTGCTTCCAAGCCTACCTACTGGTTGT 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177540813824