Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq3692 78.8 8e-13 seq2322 78.8 8e-13 >seq3692 Length=232 Score = 78.8 bits (86), Expect = 8e-13 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 172 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 231 Query 141 C 141 | Sbjct 232 C 232 >seq2322 Length=709 Score = 78.8 bits (86), Expect = 8e-13 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 556 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 497 Query 141 C 141 | Sbjct 496 C 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415979745220