Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq2677 136 6e-30 >seq2677 Length=600 Score = 136 bits (150), Expect = 6e-30 Identities = 145/190 (76%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 78 ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCT 137 ||||| | | |||||||| ||| || || |||||||||||||||| | || | || | Sbjct 191 ACAACCGATACACCAGAGATTTACCCTTCTCGGTCCTCTCGTACTAGAGTTAGATTCTTT 132 Query 138 CAAATTTCCTACGCCCACGACG-GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCA 196 || |||| | | | |||||| ||| ||||||||| ||||||||| | |||| Sbjct 131 CATTTTTCAAAATATCTATAGAAGATAGGAACCAAACTGTCTCACGACGTTCTAACCCCA 72 Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 ||| ||| || ||||||| ||||||||||| ||||||||| |||| ||||||| ||||| Sbjct 71 ACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGAACCTTCTTCAGCTCCAGG 12 Query 257 ATGAGACGAG 266 ||| || ||| Sbjct 11 ATGTGATGAG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780761983336