Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1943 102 2e-19 >seq1943 Length=781 Score = 102 bits (112), Expect = 2e-19 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTA-GCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||| ||||| | ||||||||| ||| | ||||||| | | ||| |||| | Sbjct 626 GCGTAAGATTATGGTAGTTGGTAGTTTAATAGACTACCAAGCCTATTATCTTTAGCTGGT 567 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 ||| || ||||| |||||||||| |||||||||||| ||||||| | |||||| Sbjct 566 TTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGCCCAAACT-TTTTTAAAGGCAG 508 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 ||||||||||| ||| |||||| || |||| |||| |||||| Sbjct 507 CAGTGGGGAATTTTGGACAATGAGCGGAAGCTTGATCCAGCAA 465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497524730624