Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq3204 122 3e-25 seq2507 122 3e-25 >seq3204 Length=251 Score = 122 bits (134), Expect = 3e-25 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||||||||||| || |||||| ||||| ||| |||| ||||| || |||| Sbjct 61 AGACCCGAAACCGAGCGATCTAACCATGAACAGATTGAAAAATAGGTAAAACTATTTGGA 120 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || ||||| ||| |||| | ||||| || ||||| ||||| |||| |||||||||| Sbjct 121 GGATCGAACTCACATATGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAAGGCT 180 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || |||||| ||| |||||||||| || ||||| ||||| | |||| || Sbjct 181 AATCAAACTCGGAGATAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGC 230 >seq2507 Length=251 Score = 122 bits (134), Expect = 3e-25 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||||||||||| || |||||| ||||| ||| |||| ||||| || |||| Sbjct 61 AGACCCGAAACCGAGAGATCTAACCATGAACAGATTGAAAAATAGGTAAAACTATTTGGA 120 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || ||||| ||| |||| | ||||| || ||||| ||||| |||| |||||||||| Sbjct 121 GGATCGAACTCACATATGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAAGGCT 180 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || |||||| ||| |||||||||| || ||||| ||||| | |||| || Sbjct 181 AATCAAACTCGGAGATAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGC 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689515080704