Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785725.2_202015-10- 23] 2,070 sequences; 36,712,010 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq904 248 4e-63 >seq904 Length=11342 Score = 248 bits (274), Expect = 4e-63 Identities = 244/316 (77%), Gaps = 38/316 (12%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||||||||||| | ||| |||||| |||||| | Sbjct 8431 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTGTTAGGGTGTGGA 8372 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGG----------------AGGTGGGAACC----- 502 ||||| ||||| |||||||||||| || |||| |||| | Sbjct 8371 AACCCAAGCGCGAAATGAAAGTGAAGGGCAGCGCAAGTTGTCTGAGGTAGGAAACGTGTG 8312 Query 503 ------CG----TGAGGGTG-CACCATCGACCGATCCTGATGTCTTCG----GATGGATT 547 || || | ||| ||| ||||||||||| ||| ||||| || |||| Sbjct 8311 GCCTTTCGGGGCTGTGCGTGGCACTATCGACCGATCATGAAC-CTTCGTGGTGAAAGATT 8253 Query 548 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607 ||||| ||||| | |||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 8252 TGAGTTTGAGCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAA 8193 Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 ||||| ||||||||||||||| ||||| |||| ||||| |||||||||||||||||||| Sbjct 8192 GCCAGGGGAAACTCTGGTGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAAC 8133 Query 668 TTGGGTATAGGGGCGA 683 |||||||||||||||| Sbjct 8132 TTGGGTATAGGGGCGA 8117 Score = 181 bits (200), Expect = 4e-43 Identities = 136/160 (85%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || | || |||||||| | ||||||||||||| Sbjct 8979 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 8920 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 8919 ATTGGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 8860 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| || |||||||||| || Sbjct 8859 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAACCG 8820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079955598500