Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785725.2_202015-10- 23] 2,070 sequences; 36,712,010 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq261 125 2e-26 >seq261 Length=37974 Score = 125 bits (138), Expect = 2e-26 Identities = 146/193 (76%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 5 TTTACAACCCGAAG-GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||| | |||||||||| ||| ||| || |||| |||| |||| ||| ||| Sbjct 2045 TTTACAACCTAATTAGCCTTCTTCACTCACTCGGTATTGCTGGATCAAGCTTCCGCTCAT 2104 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||| ||||||||||||||||| | ||| ||| |||||||||||| ||| || Sbjct 2105 TGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATG 2163 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| |||| || ||| |||||||| ||| | | || ||| | | |||| | || Sbjct 2164 TGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACC 2223 Query 184 AACTAGC-TAATC 195 ||||| | ||||| Sbjct 2224 AACTACCATAATC 2236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222374696320