Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785725.2_202015-10- 23] 2,070 sequences; 36,712,010 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq904 609 8e-172 >seq904 Length=11342 Score = 609 bits (674), Expect = 8e-172 Identities = 462/538 (86%), Gaps = 14/538 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 6257 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 6316 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 6317 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTC 6376 Query 127 GGCCCGC--GAAG--GACCTTAACGCCAGAAAATGGTCGGT---GAAGAC---CAGTTCC 176 || | ||| || |||| | |||| ||| ||| |||| | ||| | | Sbjct 6377 ACCCAGGCAGAACCCGAGCTTACAACTAGAAC-TGGGCGGCCGCGAAGCCACCCAGATGC 6435 Query 177 G-CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG 235 | |||| | ||||||||| ||| | || ||||||||||||||| || | | | Sbjct 6436 TACATCATGGTATAAGTAAAACAACATTGAGAGTAGTGGTATTTCACGGACGGCAGAGC- 6494 Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| Sbjct 6495 -CTCCCACTTATTCTACACCTCCCAAGTCATTTCACAACGTCAGACTAGAGTCAAGCTCA 6553 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 6554 ACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTA 6613 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 6614 GACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGAT 6673 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6674 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 6733 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 6734 GTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 6791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635166151360