Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785735.2_202015-10- 23] 1,922 sequences; 36,590,891 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq247 194 4e-47 >seq247 Length=37968 Score = 194 bits (214), Expect = 4e-47 Identities = 255/347 (73%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58 ||||| | | |||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 2012 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 1954 Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| |||| |||||| | | |||||||||||| ||||||||||| |||||| | Sbjct 1953 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 1894 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGG- 177 | | | || ||||||| | | | ||| |||||| | || |||| | Sbjct 1893 GAAACAAATTAGAGCTCAACTCTATAAATTTTTTCAAAACTGAAAAACTTGAGTATAAAT 1834 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || | ||||||| ||| || || | | |||| ||| |||| ||| ||||| ||| Sbjct 1833 AGAGGATAATGGAATTTCTATTGGAGTGATAAAATACGTTGATAATAGAAGGAAGACCTA 1774 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 |||||||||| | |||| | || |||||||||||| ||||||| |||| ||| | Sbjct 1773 TGGCGAAGGCAATTATCTGGG-TATATACTGACACTGAGAAACGAAAGCTTGGGTAGCGA 1715 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 || ||||||||||||| ||||||||| || ||||||||||| | ||| Sbjct 1714 ACGGGATTAGATACCCCGGTAGTCCATGCTGTAAACGATGAGTGCTA 1668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203176874496