Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000785735.2_202015-10- 23] 1,922 sequences; 36,590,891 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq247 73.4 8e-11 >seq247 Length=37968 Score = 73.4 bits (80), Expect = 8e-11 Identities = 146/214 (68%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTG 126 |||| ||| | || ||||| ||||||| | | ||||| || |||| | | Sbjct 2019 TTTTCCTCCTTAATGAAAGAGTTTTACAACCTAATTAGCCTTCTTCACTCACTCGGTATT 2078 Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| ||| || || ||||| |||| ||||| ||||||||||| | ||||| Sbjct 2079 GCTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 2137 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 || |||||||||||| ||||||||| || | | || ||| | | ||| || |||| Sbjct 2138 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 2197 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACC-TAAT 279 || ||| | | ||| | || |||||| |||| Sbjct 2198 CTTGGTAGTCTATTAAACTACCAACTACCATAAT 2231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068779457664