Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001707905.1_202016-08- 18] 2,393 sequences; 38,203,779 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2296 123 6e-26 >seq2296 Length=10471 Score = 123 bits (136), Expect = 6e-26 Identities = 237/341 (70%), Gaps = 10/341 (3%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||| | || || ||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 8267 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 8209 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGAC--AG 118 || ||| ||| ||||||| | | ||||||||| || | ||| |||| | |||| | Sbjct 8208 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 8149 Query 119 GTGTGAAATCCCCGGGCTTAAC-CTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTG 177 | |||| | ||| ||| || |||| || |||| | ||| |||| | Sbjct 8148 GAAACAAATTA--GAGCTCAACTCTATAAATTTT-TTCAAAACTGAAAAACTTGAGTATA 8092 Query 178 TC-AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACAC 236 ||||| ||||||| | || || | |||| ||| |||| | ||||| || Sbjct 8091 AATAGAGGATAATGGAATTTCTATTGGAGTGATAAAATACGTTGATAATAGAAGGAAGAC 8032 Query 237 CAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC 296 | |||||||||||| ||||| | |||||| || | |||||||| |||| ||| Sbjct 8031 CTATGGCGAAGGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCTTGGGTAGC 7972 Query 297 AAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||| ||||||||||||| ||||||||| || |||||||| Sbjct 7971 GAACGGGATTAGATACCCCGGTAGTCCATGCTGTAAACGAT 7931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289569139872