Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001707905.1_202016-08- 18] 2,393 sequences; 38,203,779 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq2296 239 1e-60 >seq2296 Length=10471 Score = 239 bits (264), Expect = 1e-60 Identities = 356/499 (71%), Gaps = 37/499 (7%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 7861 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 7802 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | || | | Sbjct 7801 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAAT---TTTA-ATA 7753 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | ||| | | | ||||| | ||||||| ||||||||||||||| Sbjct 7752 TAAAATTTTATATTA--------AAA---ACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 7704 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 7703 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTATTAGTTGCTAATTT 7644 Query 245 ATTA------AGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 |||| | ||||||||| | ||| | ||||||||||| Sbjct 7643 ATTATAAAAAATAAAAGCACTCTAATAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 7584 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 7583 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 7525 Query 359 -ACAAAGGGCAGCGAAACCG----CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 |||| | | ||| | | | | | |||||||| ||| || | || |||| Sbjct 7524 CACAATGAGAAGCAATAATGATTAAAAATTGGAGCAAATCTTTAAAAATTATCCT-AGTT 7466 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC 473 |||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| |||| Sbjct 7465 CGGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGC 7406 Query 474 ATGCTACGGTGAATACGTT 492 ||||| ||||||||| ||| Sbjct 7405 ATGCTGCGGTGAATATGTT 7387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503964009280