Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001707905.1_202016-08- 18] 2,393 sequences; 38,203,779 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq148 188 2e-45 >seq148 Length=19971 Score = 188 bits (208), Expect = 2e-45 Identities = 341/494 (69%), Gaps = 40/494 (8%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 9734 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 9676 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| || | || |||| ||| | | | |||||||| Sbjct 9675 TACACTGTCT---------ATTTTTAAA-AATATTAGTTATTTATTTTAATAAGAGTGGT 9626 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGT---GGCCGCATCATAGTCTCCCACCTAT 251 ||||||| || | |||| |||||||| || | | || |||||| ||| Sbjct 9625 ATTTCAAGAATATTTAAACAATTTACTAGCGTAAAGGTCTAAGCAAT---TCCCACTTAT 9569 Query 252 CCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTT 310 ||||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| Sbjct 9568 GCTACACATATTAGATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTC 9509 Query 311 CGTCCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| | | ||| | ||||||| || || | ||| ||||| | | || | | Sbjct 9508 CGTCTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATT 9450 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 9449 GGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAAT 9390 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGC 489 ||||||||||||||| || | |||||| ||||||||||||||| |||| ||| || Sbjct 9389 TTCGCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGC 9330 Query 490 CTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTC 549 | | ||| | |||| |||| |||||||||||||||||| ||| Sbjct 9329 GT-AAACATC------------------TCCTATTAATCTTCCAGCACCGGGCAGGTGTC 9289 Query 550 AGTCCGTATACCTC 563 || || ||||| || Sbjct 9288 AGACCCTATACATC 9275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702359261568