Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712645.1_202016-08- 24] 2,830 sequences; 37,002,228 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq23 114 3e-23 >seq23 Length=1150 Score = 114 bits (126), Expect = 3e-23 Identities = 235/341 (69%), Gaps = 10/341 (3%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGT 60 ||| | || || ||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 426 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 484 Query 61 GCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGAC--AG 118 || ||| ||| ||||||| | | ||||||||| || | ||| |||| | |||| | Sbjct 485 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 544 Query 119 GTGTGAAATCCCCGGGCTTAAC-CTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTG 177 | |||| | ||| ||| || |||| || |||| ||| |||| | Sbjct 545 GAAACAAATTA--GAGCTCAACTCTATAAATTTT-TTCAAAACTGATAAACTTGAGTATA 601 Query 178 TC-AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACAC 236 ||||| ||||||| | || || | |||| ||| |||| | ||||| || Sbjct 602 AATAGAGGATAATGGAATTTCTATTGGAGTGATAAAATACGTTGATAATAGAAGGAAGAC 661 Query 237 CAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC 296 | |||||||||||| ||||| | |||||| || | |||||||| |||| ||| Sbjct 662 CTATGGCGAAGGCAATTATCTGGGTATATACTGACACTGAGAAACGAAAGCTTGGGTAGC 721 Query 297 AAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||| |||||||| |||| ||||||||| || |||||||| Sbjct 722 GAACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGAT 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289563504320