Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712645.1_202016-08- 24] 2,830 sequences; 37,002,228 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq23 150 5e-34 >seq23 Length=1150 Score = 150 bits (166), Expect = 5e-34 Identities = 237/341 (70%), Gaps = 30/341 (9%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 832 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 891 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 892 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTAATA 940 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | ||| | | ||||| | ||||||| ||||||||||||||| Sbjct 941 TAAAATTTTATATT-----------AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 989 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 990 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTATTAGTTGCTAATTT 1049 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || ||||||||| | ||| | ||||||||||| Sbjct 1050 ATTATATAAAATAAAAGCACTCTAATAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 1109 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACAC 339 | |||||||| || ||||| ||||||||| ||||||||||| Sbjct 1110 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACAC 1150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503957436800