Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712645.1_202016-08- 24] 2,830 sequences; 37,002,228 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq23 123 5e-26 >seq23 Length=1150 Score = 123 bits (136), Expect = 5e-26 Identities = 138/179 (77%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| ||| |||| |||||||| |||| ||| |||||||||| |||||| Sbjct 381 CCTTCTT-CACTCACTCGGTATTG-CTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCC 324 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||||||||||| | ||| ||| |||||||||||| ||| |||| |||||||| || Sbjct 323 CACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCT 265 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC-TAATC 194 ||| ||||| || ||| | | |||||| | |||| |||||||| | ||||| Sbjct 264 TTCAAACCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACCAACTACCATAATC 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071969662400