Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712645.1_202016-08- 24] 2,830 sequences; 37,002,228 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq23 113 9e-23 >seq23 Length=1150 Score = 113 bits (124), Expect = 9e-23 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | || | | |||||| ||| || |||||||||||||| | ||| | Sbjct 359 GCTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 301 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| || |||| ||| | || Sbjct 300 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 241 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | |||||| |||||||||| ||||| ||| | | ||||||| | || | Sbjct 240 CTTGGTAGTCTATTAAACTACCAACTACCATAATCTTGCGCAAACTCATCTTTTAACGTT 181 Query 186 A 186 | Sbjct 180 A 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998371745280