Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712645.1_202016-08- 24] 2,830 sequences; 37,002,228 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1229 179 1e-42 >seq1229 Length=2640 Score = 179 bits (198), Expect = 1e-42 Identities = 339/493 (69%), Gaps = 38/493 (8%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 1040 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 1098 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| || | || |||| ||| | | | |||||||| Sbjct 1099 TACACTGTCT---------ATTTTTAAA-AATATTAGTTATTTATTTTAATAAGAGTGGT 1148 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGTGGCCGCATCATAGTC--TCCCACCTATC 252 ||||||| | | |||| |||||||| ||| || |||||| ||| Sbjct 1149 ATTTCAAGATTATTTAAACAATTTACTAGCGTAAAG--ATCTAAGCAATTCCCACTTATG 1206 Query 253 CTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTC 311 ||||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| | Sbjct 1207 CTACACATATTAGATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCC 1266 Query 312 GTCCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTT 370 ||| | | ||| | ||||||| || || | ||| ||||| | | || | | Sbjct 1267 GTCTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTG 1325 Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 1326 GAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATT 1385 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCC 490 |||||||||||||| || | |||||| ||||||||||||||| |||| ||| || Sbjct 1386 TCGCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGCG 1445 Query 491 TCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCA 550 | | ||| | |||| |||| |||||||||||||||||| |||| Sbjct 1446 T-AAACATC------------------TCCTATTAATCTTCCAGCACCGGGCAGGTGTCA 1486 Query 551 GTCCGTATACCTC 563 | || ||||| || Sbjct 1487 GACCCTATACATC 1499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702351822080