Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712655.1_202016-08- 24] 2,422 sequences; 38,111,184 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq511 91.5 4e-16 >seq511 Length=37049 Score = 91.5 bits (100), Expect = 4e-16 Identities = 174/246 (71%), Gaps = 19/246 (8%) Strand=Plus/Minus Query 160 CTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAG-TCGCTGACCCATTATA 218 |||||||| | |||| |||||||| || | | ||||||| | |||| |||||||| Sbjct 8234 CTACGCCTACTTTATTAAATTAAGCTT-GCTA-TAAAAATAAACTTGCTGGCCCATTATG 8177 Query 219 CAAAAGGTACGCAGTCACCC---AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTT 275 |||||||||| | ||||| || ||||| ||| | || |||| ||| ||| Sbjct 8176 CAAAAGGTACACTGTCACTTTATAAAAAAGT----TCCAATTGATTGTTAACATTAAGTT 8121 Query 276 TCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTT-CGCCTTTCCCTCACGGTACTAG 334 |||| || ||||||| | || |||||||| | ||||||| | || ||||| | Sbjct 8120 TCAGAAT-TATTTCAAAC-----TCACAAGTTCTTTTTCACCTTTCCTTTACAGTACTTG 8067 Query 335 TTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACA 394 |||||||||| ||| | | | | | || || |||| ||||||||| ||||||| | | Sbjct 8066 TTCACTATCGATCATTAATTTCT-TAAAGGTTTTGAGGGTGGTCCCCCAATATTCA-AAA 8009 Query 395 AAGTTT 400 ||| || Sbjct 8008 AAGATT 8003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241569928448