Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712655.1_202016-08- 24] 2,422 sequences; 38,111,184 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2098 82.4 9e-14 seq1563 82.4 9e-14 >seq2098 Length=34850 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 4778 AAACCAACAAAATAGACCACCAAGGCCGTATCTTATTATTCCATGCTAATGTATTCAAAT 4837 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 4838 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 4880 >seq1563 Length=4632 Score = 82.4 bits (90), Expect = 9e-14 Identities = 72/87 (83%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 11 AACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT 70 |||||||||||||| || | ||||||||| |||||||||||| ||||| |||| Sbjct 23 AACCAACAAAATAGTACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCGA 81 Query 71 AA-GCCTGCTTTGAACACTCTAATTTT 96 | |||||||||||||||||||||||| Sbjct 82 ATTGCCTGCTTTGAACACTCTAATTTT 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595186034748