Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712655.1_202016-08- 24] 2,422 sequences; 38,111,184 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq1085 75.2 2e-11 >seq1085 Length=68004 Score = 75.2 bits (82), Expect = 2e-11 Identities = 136/197 (69%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 51 AGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACC--GTCTA 108 ||||||| || ||||||||||| || ||| || ||| |||||| || | Sbjct 52542 AGCGTATCGCCGGCCGTCGCGTGCACCCTGCCAGTGGTCGCAGCTACCACGTGAAGTTTG 52483 Query 109 CAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAA 168 | ||||| ||||| || |||||||||||||| || ||||| ||| | |||||||| Sbjct 52482 CC--CCGCCTAAGGTGGCCGGCAAGGACGATGTCACGGGCGAGCCGCTGATCCAGCGCAA 52425 Query 169 GGACGACACCGAAGAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCC 228 |||||||| ||||| || || | ||||| | || ||| ||| || |||| Sbjct 52424 GGACGACAACGAAGCCACGCTTGGCTCGCGCCTCCAGGCTTTCCACAAGCAGACGCAGCC 52365 Query 229 GCTGGTGGACTTCTACC 245 || | |||||||||| Sbjct 52364 CGTGATCGACTTCTACC 52348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899178221376