Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712705.1_202016-08- 24] 1,910 sequences; 36,780,765 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq563 102 1e-19 >seq563 Length=14408 Score = 102 bits (112), Expect = 1e-19 Identities = 169/242 (70%), Gaps = 14/242 (6%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| ||||||||||| ||||| || |||||||| ||||| | || ||| | ||| Sbjct 3383 CTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCAT-TTAGCAGAGTCCT 3325 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGT 126 ||||||| ||||||||||| ||| ||||| | || ||| | | | || Sbjct 3324 AAGTTTTTATTAAACAGTCGCAACCCCCTATTTTGTGACACCTA-ATTATTTTAAA---- 3270 Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186 | | || | || || |||||||||||| | ||||||||||| |||||| Sbjct 3269 ---TAATTAG-----GTACTTTTTATCCCGAAGTTACAAAGTCATTTTGCCGAGTTCCTT 3218 Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 | | ||||| | | | ||||||| | ||| |||| ||||||||||||||||| || Sbjct 3217 CAATATAGTTCTCTCATTCACCTTAGTCTACTCGACCTATCCACCTGTGTCGGTTTAGGG 3158 Query 247 TA 248 || Sbjct 3157 TA 3156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694387151430