Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712705.1_202016-08- 24] 1,910 sequences; 36,780,765 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq515 342 9e-92 seq118 228 1e-57 >seq515 Length=17264 Score = 342 bits (378), Expect = 9e-92 Identities = 221/242 (91%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17264 CTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACA 17205 Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 || ||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 17204 ATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAAC 17145 Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 17144 GTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACC 17085 Query 233 TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||| | ||||| | | ||||||||||||||||||||| |||||| |||||||||| Sbjct 17084 TCTAGCTTAAAATTCTAAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATT 17025 Query 293 CA 294 || Sbjct 17024 CA 17023 >seq118 Length=75070 Score = 228 bits (252), Expect = 1e-57 Identities = 141/151 (93%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 74519 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 74460 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 74459 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 74400 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATG 181 |||||||| |||||||||||||||||||||| Sbjct 74399 CATCGAAGAATCAAAAAGCAACGTCGCTATG 74369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854383680960