Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712705.1_202016-08- 24] 1,910 sequences; 36,780,765 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq563 156 1e-35 >seq563 Length=14408 Score = 156 bits (172), Expect = 1e-35 Identities = 310/452 (69%), Gaps = 13/452 (3%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||||||||||| ||||||||| ||||| ||| |||| ||||| || |||| Sbjct 2358 AGACCCGAAACCGAGTGATCTAACCATGAACAGATTGAAAAATAGGTAAAACTATTTGGA 2417 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || ||||| ||| |||| | ||||| || ||||| ||||| |||| |||||||||| Sbjct 2418 GGATCGAACTCACATATGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAAGGCT 2477 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || |||||| ||| |||||||||| || ||||| ||||| | |||| || | | ||| Sbjct 2478 AATCAAACTCGGAGATAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGCATTTAAAATC 2537 Query 214 ACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGC 273 | ||||||||||||| | |||||||||| | |||||| || ||| Sbjct 2538 TTTTTTTGGGGTAGAGCACTCATTGAGCTAGGGGGT-GTAAAAACTTACTGAATTCTTGG 2596 Query 274 AAACTCCGAATGCGCATCA--GT--TTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTC 329 ||||||||||| | | | || |||| || || | || ||||||||| Sbjct 2597 AAACTCCGAATACAAAAAAACGTAATTTA----AATAGACAGACATTAGGCGCTAAGGTC 2652 Query 330 CGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA-GCTAAGT 388 | | ||||| || | || || | ||||||| | | |||| | | |||||| Sbjct 2653 TATTGTCAAGAGGGAAACAGCCCAGATTGCTCGCTAAGGTCTCTAAATAATATTCTAAGT 2712 Query 389 TAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCA 448 ||| || ||||| | || ||| | || | || |||||||||||||||| || Sbjct 2713 GAAA--AAGGAAGTGAAAAAATTATTACAACCAGTAGGTAGGCTTGGAAGCAGCCA-TCC 2769 Query 449 TTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||| |||||| |||||| | ||| || Sbjct 2770 TTTAAAGAAAGCGTAATAGCTCATTGGTCTAG 2801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689567728640