Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712705.1_202016-08- 24] 1,910 sequences; 36,780,765 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq563 179 1e-42 >seq563 Length=14408 Score = 179 bits (198), Expect = 1e-42 Identities = 339/493 (69%), Gaps = 38/493 (8%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 3807 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 3749 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| || | || |||| ||| | | | |||||||| Sbjct 3748 TACACTGTCT---------ATTTTTAAA-AATATTAGTTATTTATTTTAATAAGAGTGGT 3699 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGTGGCCGCATCATAGTC--TCCCACCTATC 252 ||||||| | | |||| |||||||| ||| || |||||| ||| Sbjct 3698 ATTTCAAGATTATTTAAACAATTTACTAGCGTAAAG--ATCTAAGCAATTCCCACTTATG 3641 Query 253 CTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTC 311 ||||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| | Sbjct 3640 CTACACATATTAGATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCC 3581 Query 312 GTCCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTT 370 ||| | | ||| | ||||||| || || | ||| ||||| | | || | | Sbjct 3580 GTCTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTG 3522 Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 3521 GAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATT 3462 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCC 490 |||||||||||||| || | |||||| ||||||||||||||| |||| ||| || Sbjct 3461 TCGCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGCG 3402 Query 491 TCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCA 550 | | ||| | |||| |||| |||||||||||||||||| |||| Sbjct 3401 T-AAACATC------------------TCCTATTAATCTTCCAGCACCGGGCAGGTGTCA 3361 Query 551 GTCCGTATACCTC 563 | || ||||| || Sbjct 3360 GACCCTATACATC 3348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702367484160