Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq534 242 8e-62 >seq534 Length=15242 Score = 242 bits (268), Expect = 8e-62 Identities = 272/366 (74%), Gaps = 17/366 (5%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| ||||| |||||||| | ||||||| | | ||||| Sbjct 4695 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 4636 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4635 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 4576 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||||||||| ||| || | ||| | |||| ||| Sbjct 4575 GAGTTACGGCCGCCGTTTACTGGGACTTCCATTTAATGCGT---------AAACATCTCC 4525 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||||||||||||||| ||||| |||||||||| | || | | ||||||| Sbjct 4524 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 4465 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC--------TGTC 298 | ||| |||||| ||||||||||| |||||| || || | | Sbjct 4464 AGTCCTAAGTTTTTATTAAACAGTCGCAACCCCCTATTTAGTGACACCTAATTATTTTTA 4405 Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 ||| ||| || || |||| ||||||| |||||||||||||||||||| | ||| Sbjct 4404 ATAATTAGGTACTTTTTATCCCGAAGTTACAAAGTCATTTTGCCGAGTTCCTTCAATATA 4345 Query 359 GTTCTC 364 |||||| Sbjct 4344 GTTCTC 4339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062378390784