Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq534 109 1e-21 >seq534 Length=15242 Score = 109 bits (120), Expect = 1e-21 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||||| | || |||||||||||||||||| ||||| ||||||||||||||| | Sbjct 4874 GACAGTGTATGGTTGGTAGTTTGACTGGGGCGGTCACCTCCTAAAGAGTAACGGAGGTGT 4933 Query 173 CCAAAGATACCCTCAGCTTGGATGGAA--ACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 ||||| || |||| |||||| | | || | | || || || | ||| || Sbjct 4934 ACAAAGGTAAGCTCAAATTGGATTTTAGTATCAATTGTAGAGCATAATGGTATAAGCTTG 4993 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||| | | || || | |||||||||||||||| | || ||||||| | Sbjct 4994 CTTGACTGTAAGATAGACATATCAAACAGGGACGAAAGTCGGTCATAGTGATCCGATAAT 5053 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| | |||||| ||||||||||| ||| | ||||||| Sbjct 5054 TCTTTGTGGAAAGATTATCGCTCAACGGATAAAAGGTACTCCGGGGATA 5102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982380017984