Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq844 125 2e-26 >seq844 Length=6061 Score = 125 bits (138), Expect = 2e-26 Identities = 148/195 (76%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| ||| |||| |||||||| |||| ||| |||||||||| |||||| Sbjct 3883 CCTTCTT-CACTCACTCGGTATTG-CTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCC 3940 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||||||||||| | ||| ||| |||||||||||| ||| |||| |||||||| || Sbjct 3941 CACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCT 3999 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC-TAATCC 195 ||| ||||| || ||| | | |||||| | |||| |||||||| | ||||| Sbjct 4000 TTCAAACCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACCAACTACCATAATCT 4059 Query 196 GACCTAGGCTCATCT 210 || | ||||||| Sbjct 4060 TACGCAAACTCATCT 4074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071978195520