Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq534 91.5 4e-16 >seq534 Length=15242 Score = 91.5 bits (100), Expect = 4e-16 Identities = 174/246 (71%), Gaps = 19/246 (8%) Strand=Plus/Minus Query 160 CTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAG-TCGCTGACCCATTATA 218 |||||||| | |||| |||||||| || | | ||||||| | |||| |||||||| Sbjct 3451 CTACGCCTACTTTATTAAATTAAGCTT-GCTA-TAAAAATAAACTTGCTGGCCCATTATG 3394 Query 219 CAAAAGGTACGCAGTCACCC---AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTT 275 |||||||||| | ||||| || ||||| ||| | || |||| ||| ||| Sbjct 3393 CAAAAGGTACACTGTCACTTTATAAAAAAGT----TCCAATTGATTGTTAACATTAAGTT 3338 Query 276 TCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTT-CGCCTTTCCCTCACGGTACTAG 334 |||| || ||||||| | || |||||||| | ||||||| | || ||||| | Sbjct 3337 TCAGAAT-TATTTCAAAC-----TCACAAGTTCTTTTTCACCTTTCCTTTACAGTACTTG 3284 Query 335 TTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACA 394 |||||||||| ||| | | | | | || || |||| ||||||||| ||||||| | | Sbjct 3283 TTCACTATCGATCATTAATTTCT-TAAAGGTTTTGAGGGTGGTCCCCCAATATTCA-AAA 3226 Query 395 AAGTTT 400 ||| || Sbjct 3225 AAGATT 3220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241574745856