Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F001712715.1_202016-08- 24] 2,034 sequences; 37,458,212 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq844 125 2e-26 >seq844 Length=6061 Score = 125 bits (138), Expect = 2e-26 Identities = 146/193 (76%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 5 TTTACAACCCGAAG-GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||| | |||||||||| ||| ||| || |||| |||| |||| ||| ||| Sbjct 3867 TTTACAACCTAATTAGCCTTCTTCACTCACTCGGTATTGCTGGATCAAGCTTCCGCTCAT 3926 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||| ||||||||||||||||| | ||| ||| |||||||||||| ||| || Sbjct 3927 TGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATG 3985 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| |||| || ||| |||||||| ||| | | || ||| | | |||| | || Sbjct 3986 TGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAACTACC 4045 Query 184 AACTAGC-TAATC 195 ||||| | ||||| Sbjct 4046 AACTACCATAATC 4058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222375136384