Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000333055.2_202015-10- 27] 5,541 sequences; 46,077,030 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq3710 89.7 5e-16 >seq3710 Length=1686 Score = 89.7 bits (98), Expect = 5e-16 Identities = 92/118 (78%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 65 ACTCGTCATCAGCTCCCGGCCTTAGA--ATCCCGGATTTACCTAAGATTCCAGCCTACCA 122 ||||||| || | | ||| |||||| ||||||||||| || ||||| | | |||||| Sbjct 1686 ACTCGTC-TCGGTGCTCGGTCTTAGAGGATCCCGGATTTGCCAAAGATCCAAACCTACCG 1628 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||| | |||||||||||||| | |||| |||||||||||||||||||||| Sbjct 1627 CCTTTCCCCAGGACAACCAACGCCTGGTACACCTAACCTTCTCCGTCCCTCCATCGCA 1570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518372173098