Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000333055.2_202015-10- 27] 5,541 sequences; 46,077,030 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1 116 7e-24 >seq1 Length=129477 Score = 116 bits (128), Expect = 7e-24 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| | Sbjct 125416 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 125358 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| || |||| ||| | || Sbjct 125357 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 125298 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| | || ||| |||||||||| ||||| ||| | | ||||||| | || | Sbjct 125297 CTTGGTAGTCTTTTAAACTACCAACTACCATAATCTTACGCAAACTCATCTTTTAACGTT 125238 Query 186 AAA 188 ||| Sbjct 125237 AAA 125235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998344678656