Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000333055.2_202015-10- 27] 5,541 sequences; 46,077,030 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3710 196 9e-48 >seq3710 Length=1686 Score = 196 bits (216), Expect = 9e-48 Identities = 245/326 (75%), Gaps = 24/326 (7%) Strand=Plus/Plus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| ||||||||||||||| | | |||||||||||||||||||| |||||||||||| Sbjct 193 ACACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTAGTAACTTGCGATAAGCGT 252 Query 66 CGGGGAGTGAGCAA-ACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC---GGC- 120 | ||| || || | ||| |||| | ||||||||||||||||||||| ||| Sbjct 253 AGATGAGGCAGTAACAGCCAC-TTGAGTCTACGATTTCCGAATGGGGAAACCCACTGGCA 311 Query 121 ----CCTTTGGGTCATTGCATGCTGAATACATAGGT--ATGCAAAGCGAACGCGGCGAAC 174 || | |||||| ||||||||||| | ||| |||||||| || |||| Sbjct 312 TAAGCC--AGTATCATTG---AGTGAATACATAGCTCAATG--AAGCGAACCGGGAGAAC 364 Query 175 TGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAG 234 ||||||||||||||| | ||||||||||||||||||||||||| ||||||| |||||| Sbjct 365 TGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCGAAAGTAGCGGCGAG 424 Query 235 CGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAA-TAG 293 |||||| |||| |||| ||| | || || || ||| ||| |||||||| | Sbjct 425 CGAAATTGGATTAGCCCTTAAGCTTTACATG---TGTTAGACGAACGGTCTGGAAAGTCC 481 Query 294 GAGCCATAGCGGGTGATAGCCCCGTA 319 || | ||| ||||||||| |||||| Sbjct 482 GA-CGATACAGGGTGATAGTCCCGTA 506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918349111456