Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_027197.1 Length=3753 Score E Sequences producing significant alignments: (Bits) Value seq1914 100 7e-18 >seq1914 Length=3961 Score = 100 bits (110), Expect = 7e-18 Identities = 215/319 (67%), Gaps = 2/319 (1%) Strand=Plus/Plus Query 1435 TCAAGAGCAACGGTGACCCTCACATCTGGCT-TACTGGTACTCCTGGTTCTGGCAAGTCT 1493 |||||| ||||||| |||||| |||||| | ||| || ||||||| || || ||| Sbjct 1649 TCAAGACCAACGGTTCCCCTCATATCTGGGTATAC-GGACCTCCTGGCCAGGGAAAATCT 1707 Query 1494 GCCATCTTGCAGGTCATCTATCCTGCGTATTACAACAAGAATCTGGACAACCGTTTCTTC 1553 || | ||| | | ||||| ||||| ||||| || ||||||| |||||| Sbjct 1708 GCAGTGTTGTCATTTGTGTATCCGAACACCTACAAGAAGAACCTATACAACCGATTCTTC 1767 Query 1554 GACTTGTACCAGCCAAAAGTGCACACGCACATGCTTCTTCAAGATGTCGATCACACGACG 1613 ||||||||| | |||||||| || | || || |||| | ||||| | Sbjct 1768 GACTTGTACGACGATAAAGTGCATGACCATGTCCTACTGGAAGACCTGGATCATGATGCT 1827 Query 1614 GTTGAAAAGTTGGGAGTCCAGTTCCTAAAGACCATCTGTGACGAAGCTGGTTTCCCAGTT 1673 || || | | | | ||| | |||||| |||||||||| | || ||||| | Sbjct 1828 GTGGACTCGCTCTCCACCAATTTCATCAAGACCCTCTGTGACGAGTCCGGATTCCCCATC 1887 Query 1674 GACCAAAAGTACAAGACGCCGCAACTGGCTCGTACCACTGTCTTGGTCTCTTCCAACTTC 1733 ||||| || ||||||||||| ||||| | || | || || |||| | ||||||| Sbjct 1888 GACCAGAAATACAAGACGCCTCAACTCACCCGATCGACGATCCTGGTAACAAGCAACTTC 1947 Query 1734 ACCATCAACGATGTGATTC 1752 ||||| ||||||||||| Sbjct 1948 ACCATTGCCGATGTGATTC 1966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11896423754930