Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20lateralis_20[genbank_20GCA_5F000500205.2_202016-07- 21] 9,039 sequences; 52,448,581 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2042 95.1 5e-14 >seq2042 Length=22109 Score = 95.1 bits (104), Expect = 5e-14 Identities = 162/233 (70%), Gaps = 9/233 (4%) Strand=Plus/Plus Query 222472 CACCGCGACCTCAAGTCCAGCAACCTGCTCGTGGGCGACTCCCTGTCGATGAAGGTGGCC 222531 ||||| ||||||||| | ||| | ||||||| | | | | || ||| || | Sbjct 5806 CACCGAGACCTCAAGAGCCCGAACTTACTCGTGGACAAGAACTTTAACATTAAGTTGTCG 5865 Query 222532 GACTTTGGGTTCGCGCGGATCAAGGAAACCAACGCC---ACCATGACACGG---TGCGGC 222585 |||||||| | || ||| |||||| || ||| |||||||| | |||||| Sbjct 5866 GACTTTGGCCTGGCCCGGGTCAAGG---CCCACGTGCAGACCATGACGGGCAACTGCGGC 5922 Query 222586 ACGCCGTACTGGACGGCACCCGAGATCATCACCCAAGAGCGCTACACCGAGAAGGCCGAC 222645 ||| | |||| ||| |||||| | | | | || ||||| |||||||||||| Sbjct 5923 ACGGTTCAGTGGATGGCGCCCGAGGTGCTAGGCAATCAGAAGTACACGGAGAAGGCCGAC 5982 Query 222646 GTCTACTCGTTCGGCATCATCATGTGGGAGGTCATCACGGGCAAGCGTCCCTA 222698 |||| ||||||||| ||| |||| |||||| || |||||||| || |||| || Sbjct 5983 GTCTTCTCGTTCGGGATCGTCATCTGGGAGATCGTCACGGGCGAGTGTCCGTA 6035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084491873056122