Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq965 123 3e-26 >seq965 Length=15598 Score = 123 bits (136), Expect = 3e-26 Identities = 117/152 (77%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTC---CCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCA 79 |||||||||| |||| | || | | |||| |||||||||| |||| | ||| |||| Sbjct 5754 CGGGGTCTTTCCGTCTAACTATAGAG---AATCCGCATCTTCACGGATAATTCAAATTCA 5810 Query 80 CTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTA 139 ||||| | | ||||||| |||||||||| |||||||||||||||| Sbjct 5811 CTGAGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTA 5870 Query 140 CCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||||||||||||||||||||||||| Sbjct 5871 CCCGACAAGGAATTTCGCTACCTTAGGACCGT 5902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547072569261