Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq965 122 2e-25 >seq965 Length=15598 Score = 122 bits (134), Expect = 2e-25 Identities = 136/174 (78%), Gaps = 7/174 (4%) Strand=Plus/Plus Query 24 TCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCT 83 |||| ||| ||| |||| |||||||| |||||||| |||||||||| ||||||||||||| Sbjct 1728 TCACTCACTCGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCT 1786 Query 84 GCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGAC 143 |||| | ||| ||| |||||||||||| ||| |||| |||||||| || ||| || Sbjct 1787 GCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAAC 1845 Query 144 CAGTTACGGATCGTCGCCTTGGTGAGCCATT--ACCTCACCAACTAGC-TAATC 194 ||| || ||| | | |||||| || | || | || |||||||| | ||||| Sbjct 1846 CAGCTAAAGATAATAGGCTTGGT-AGTCTTTTAAACT-ACCAACTACCATAATC 1897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071742301920