Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq965 114 3e-23 >seq965 Length=15598 Score = 114 bits (126), Expect = 3e-23 Identities = 141/189 (75%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||| | |||| | |||||| ||| || |||||||||||||| | ||| | Sbjct 1744 GCTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTT 1802 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||||||||||||||||| | ||| || ||| || |||| ||| | || Sbjct 1803 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 1862 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCG-A 184 |||||| | || ||| |||||||||| ||||| ||| | | ||||||| | || Sbjct 1863 CTTGGTAGTCTTTTAAACTACCAACTACCATAATCTTGCGCAAACTCATCTTTTAACGTT 1922 Query 185 TAAATCTTT 193 |||| |||| Sbjct 1923 TAAAACTTT 1931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998159994624