Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq965 114 3e-23 >seq965 Length=15598 Score = 114 bits (126), Expect = 3e-23 Identities = 144/194 (74%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAG-GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCA 62 |||||||||| | ||| || ||| ||| ||| || |||| |||| |||| ||| || Sbjct 1705 CTTTACAACCTAATTAGCCGTCATCACTCACTCGGTATTGCTGGATCAAGCTTTCGCTCA 1764 Query 63 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 122 |||| ||| ||||||||||||||||| | ||| ||| |||||||||||| ||| | Sbjct 1765 TTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTTGGGCCGTGTCTCAGTCCCAAT 1823 Query 123 GTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGC 182 ||||||| |||| || ||| |||||||| ||| | | || ||| | | ||| | | Sbjct 1824 GTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGGCTTGGTAGTCTTTTAAACTAC 1883 Query 183 CAACTAGC-TAATC 195 |||||| | ||||| Sbjct 1884 CAACTACCATAATC 1897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222106147264